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Quote: use alphabet transformation to increase alphabet size; e.g., "A G G C T A" becomes "AG GG GC CT TA"
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pattern matching
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Handling Small Alphabets … [p. 13] For the DNA data … our algorithms and SUNDAY fail to achieve any … increasing the effectiveness of the non-occurrence heuristic will … process called alphabet transformation. … We will use [.Sum^k. transformation of Baeza-Yates, Software--Prac.&Exper., 19:257-271, 1989]. … Given a DNA string "A G G C … we have a new string "AG GG GC … Google-1 Google-2
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Topic: pattern matching (42 items)